I just stumbled upon Felipe Csaszar's blog and found his key bindings to be very very nice, if you use emacs with R a lot. Check it out:
http://www.emacswiki.org/emacs/EmacsSpeaksStatistics
Monday, September 21, 2009
Thursday, September 17, 2009
How to use the sqlite connection to AnnotationDbi packages
It is very fast and very straightforward:
library(hgu133plus2.db)
hgu133plus2_dbschema()
sql = "
select * from probes p, gene_info g, chromosome_locations c
where g._id=c._id and g._id=p._id limit 10
"
dbGetQuery(hgu133plus2_dbconn(), sql)
If you look at the last few page of the manual for AnnotationDbi [site, PDF], you will see some tips about joining different databases together.
library(hgu133plus2.db)
hgu133plus2_dbschema()
sql = "
select * from probes p, gene_info g, chromosome_locations c
where g._id=c._id and g._id=p._id limit 10
"
dbGetQuery(hgu133plus2_dbconn(), sql)
If you look at the last few page of the manual for AnnotationDbi [site, PDF], you will see some tips about joining different databases together.
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